miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|117503431|gb|EG835190.1|EG835190 GGGGATTCATGGCACAGAAGTGAGTGGGTTGGTTGGCAAAGCACGCAGTCTCACCAACTTCCTGTGGAGCAGGAAGAGAG
CACCTGAGGATGTAACACTGAGGGAAAGAGCCATGGCCCTGGAGAAGAATCTGTGGGAGAAGACAAAAGAGAAGGGTGGA
GATGTAGATCTTCAACTGCTGGAGACCCAAATCACAAAGAAAGTGCTGTCCGATCTCAGGAAGACAACATACCACTGGTC
CCCTATGAGGTATGATGAAGAGTTGGGTGTGGTGTACATGGTTGCTAAGCTGGCAGGTGGCTACGCTGCAGTGAAAAGAG
TTCTAAATGAGATAAAGAAAAGAGATTCCTCCTTCTCCCCTCATTCTCTCTTGGACTTTGGTTCAGGATTAGGAACAGCT
GTCTGGGCATCACACTCATTTTGGGGTGATGCGTTGAAGGAGATGGTGTGTGTCGACAATTCTGGGGCAATGAACACTAT
AGCAGATCGCCTTCTCAGAGGCAGCAGCGAAAAAGATGAGCCTGTCATCAAACAAGTATACTTCCGTCAGTTCCTTCCTG
TCTCCCCTAAGGTGCAATTTGATCTGGTGGTGGGGGCCTTTTCTCTGTCAGAATTGGCCAGTCAAAAGGAGAGGGAAGAT
GCCATACTCACTTTGTGGAGAAAGACCAGCTCTTATCTGGTGCTGGTAGAAAATGGGACCAAAGAGGGCCACCAAATACT
TATGGATGCCAGAGACATACTACTTAAGAAACAAGAAAGAGCAGCCCATGACCCTAGAAGACCATCAGTGTTCGCCCCAT
GTCCTCATGAATCACCTTGTCCCAAGCTGTTCCAACTGCCCTTAGTACCCTGCAACTTCTCTCAAGCCTACAGCC




Most similar to sp|Q9H7H0|MET17_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9H7H0|MET17_HUMAN Methyltransferase-like protein 17,
           mitochondrial OS=Homo sapiens GN=METTL17 PE=2 SV=1
          Length = 456

 Score =  299 bits (766), Expect = 2e-80
 Identities = 150/278 (53%), Positives = 192/278 (69%)
 Frame = +2

Query: 38  KARSLTNFLWSRKRAPEDVTLRERAMALEKNLWEKTKEKGGDVDLQLLETQITKKVLSDL 217
           + ++LT++LWSR    E   L+ RA  LEK   E         DL   E ++   VL  L
Sbjct: 86  QVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLENP-------DLSQTEEKLRGAVLHAL 138

Query: 218 RKTTYHWSPMRYDEELGVVYMVAKLAGGYAAVKRVLNEIKKRDSSFSPHSLLDFGSGLGT 397
           RKTTYHW  + Y E L +VYM A+L GG+AAV R  +EI+ R+ +F P +L+DFGSG G+
Sbjct: 139 RKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRARNPAFQPQTLMDFGSGTGS 198

Query: 398 AVWASHSFWGDALKEMVCVDNSGAMNTIADRLLRGSSEKDEPVIKQVYFRQFLPVSPKVQ 577
             WA+HS WG +L+E +CVD S AM  +A++LL+G SE  EP I  V+FRQFLPVSPKVQ
Sbjct: 199 VTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFRQFLPVSPKVQ 258

Query: 578 FDLVVGAFSLSELASQKEREDAILTLWRKTSSYLVLVENGTKEGHQILMDARDILLKKQE 757
           FD+VV AFSLSEL S+ +R + + TLWRKT  +LVLVENGTK GH +LMDARD++LK +E
Sbjct: 259 FDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMDARDLVLKGKE 318

Query: 758 RAAHDPRRPSVFAPCPHESPCPKLFQLPLVPCNFSQAY 871
           ++  DPR   VFAPCPHE PCP+L  L    C+FSQAY
Sbjct: 319 KSPLDPRPGFVFAPCPHELPCPQLTNL---ACSFSQAY 353